Lifemap

Lifemap(self, data, *, taxid_col='taxid', width=DEFAULT_WIDTH, height=DEFAULT_HEIGHT, zoom=5, legend_width=None)

Build visualization.

Parameters

Name	Type	Description	Default
data	pl.DataFrame | pd.DataFrame	Visualization data.	required
taxid_col	str	Name of the data column with taxonomy ids, by default "taxid"	'taxid'
width	int | str	Lifemap visualization width, in pixels or CSS units, by default DEFAULT_WIDTH	DEFAULT_WIDTH
height	int | str	Lifemap visualization height, in pixels or CSS units, by default DEFAULT_HEIGHT	DEFAULT_HEIGHT
zoom	int	Default Lifemap zoom level, by default 5	5
legend_width	int | None	Legend width in pixels, by default None	None

Examples

>>> import polars as pl
>>> from pylifemap import Lifemap
>>> d = pl.DataFrame({"taxid": [9685, 9615, 9994]})
>>> (
...     Lifemap(d, width="100%", height="100vh")
...     .layer_points()
...     .show()
>>> )

Methods

Name	Description
pylifemap.Lifemap.layer_points	Add a points layer.
pylifemap.Lifemap.layer_lines	Add a lines layer.
pylifemap.Lifemap.layer_donuts	Add a donuts layer.
pylifemap.Lifemap.layer_heatmap	Add a heatmap layer.
pylifemap.Lifemap.layer_screengrid	Add a screengrid layer.
pylifemap.Lifemap.show	Display the Jupyter widget for this instance.
pylifemap.Lifemap.save	Save the Jupyter widget for this instance to an HTML file.