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Create a newick for the given dataset.

Source: R/make_newick.R
make_newick.Rd

Create a newick for the given dataset.

Usage

make_newick(df)

Arguments

df

A dataframe either enriched with by the build_Lifemap function or containing at least two columns :

  • "taxid" containing NCBI format taxids

  • "ancestor" containing for each taxid, it's direct ancestor in the phylogeny

Value

A character string.