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A dataset containing NCBI information of 1000 eukaryotes. The variables are as follows:

Usage

data(kraken_res)

Format

A data frame with 4427 rows and 6 variables:

coverage_percent

Percentage of fragments covered by the clade rooted at this taxon

coverage_number

Number of fragments covered by the clade rooted at this taxon

fragment_number

Number of fragments assigned directly to this taxon

rank

A rank code, indicating (U)nclassified, (R)oot, (D)omain, (K)ingdom, (P)hylum, (C)lass, (O)rder, (F)amily, (G)enus, or (S)pecies. Taxa that are not at any of these 10 ranks have a rank code that is formed by using the rank code of the closest ancestor rank with a number indicating the distance from that rank. E.g., "G2" is a rank code indicating a taxon is between genus and species and the grandparent taxon is at the genus rank.

taxid

NCBI taxonomic ID number

name

Indented scientific name